I Preliminaries
1 Introduction
1.1 Complex Systems in a Nutshell
1.2 Topical Clusters
2 Fundamentals of Modeling
2.1 Models in Science and Engineering
2.2 How to Create a Model
2.3 Modeling Complex Systems
2.4 What Are Good Models?
2.5 A Historical Perspective
II Systems with a Small Number of Variables
3 Basics of Dynamical Systems
3.1 What Are Dynamical Systems?
3.2 Phase Space
3.3 What Can We Learn?
4 Discrete-Time Models I: Modeling
4.1 Discrete-Time Models with Difference Equations
4.2 Classifications of Model Equations
4.3 Simulating Discrete-Time Models with One Variable
4.4 Simulating Discrete-Time Models with Multiple Variables
4.5 Building Your Own Model Equation
4.6 Building Your Own Model Equations with Multiple Variables
5 Discrete-Time Models II: Analysis
5.1 Finding Equilibrium Points
5.2 Phase Space Visualization of Continuous-State Discrete-Time Models
5.3 Cobweb Plots for One-Dimensional Iterative Maps
5.4 Graph-Based Phase Space Visualization of Discrete-State Discrete-Time Models
5.5 Variable Rescaling
5.6 Asymptotic Behavior of Discrete-Time Linear Dynamical Systems
5.7 Linear Stability Analysis of Discrete-Time Nonlinear Dynamical Systems .
6 Continuous-Time Models I: Modeling
6.1 Continuous-Time Models with Differential Equations
6.2 Classifications of Model Equations
6.3 Connecting Continuous-Time Models with Discrete-Time Models
6.4 Simulating Continuous-Time Models
6.5 Building Your Own Model Equation
7 Continuous-Time Models II: Analysis
7.1 Finding Equilibrium Points
7.2 Phase Space Visualization
7.3 Variable Rescaling
7.4 Asymptotic Behavior of Continuous-Time Linear Dynamical Systems
7.5 Linear Stability Analysis of Nonlinear Dynamical Systems
8 Bifurcations
8.1 What Are Bifurcations?
8.2 Bifurcations in 1-D Continuous-Time Models
8.3 Hopf Bifurcations in 2-D Continuous-Time Models
8.4 Bifurcations in Discrete-Time Models
9 Chaos
9.1 Chaos in Discrete-Time Models
9.2 Characteristics of Chaos
9.3 Lyapunov Exponent
9.4 Chaos in Continuous-Time Models
II Systems with a Large Number of Variables
10 Interactive Simulation of Complex Systems
10.1 Simulation of Systems with a Large Number of Variables
10.2 Interactive Simulation with PyCX
10.3 Interactive Parameter Control in PyCX
10.4 Simulation without PyCX
11 Cellular Automata I: Modeling
11.1 Definition of Cellular Automata
11.2 Examples of Simple Binary Cellular Automata Rules
11.3 Simulating Cellular Automata
11.4 Extensions of Cellular Automata
11.5 Examples of Biological Cellular Automata Models
12 Cellular Automata II: Analysis
12.1 Sizes of Rule Space and Phase Space
12.2 Phase Space Visualization
12.3 Mean-Field Approximation
12.4 Renormalization Group Analysis to Predict Percolation Thresholds
13 Continuous Field Models I: Modeling
13.1 Continuous Field Models with Partial Differential Equations
13.2 Fundamentals of Vector Calculus
13.3 Visualizing Two-Dimensional Scalar and Vector Fields
13.4 Modeling Spatial Movement
13.5 Simulation of Continuous Field Models
13.6 Reaction-Diffusion Systems
14 Continuous Field Models II: Analysis
14.1 Finding Equilibrium States
14.2 Variable Rescaling
14.3 Linear Stability Analysis of Continuous Field Models
14.4 Linear Stability Analysis of Reaction-Diffusion Systems
15 Basics of Networks
15.1 Network Models
15.2 Terminologies of Graph Theory
15.3 Constructing Network Models with NetworkX
15.4 Visualizing Networks with NetworkX
15.5 Importing/Exporting Network Data
15.6 Generating Random Graphs
16 Dynamical Networks I: Modeling
16.1 Dynamical Network Models
16.2 Simulating Dynamics on Networks
16.3 Simulating Dynamics of Networks
16.4 Simulating Adaptive Networks
17 Dynamical Networks II: Analysis of Network Topologies
17.1 Network Size, Density, and Percolation
17.2 Shortest Path Length
17.3 Centralities and Coreness
17.4 Clustering
17.5 Degree Distribution
17.6 Assortativity
17.7 Community Structure and Modularity
18 Dynamical Networks III: Analysis of Network Dynamics
18.1 Dynamics of Continuous-State Networks
18.2 Diffusion on Networks
18.3 Synchronizability
18.4 Mean-Field Approximation of Discrete-State Networks
18.5 Mean-Field Approximation on Random Networks
18.6 Mean-Field Approximation on Scale-Free Networks
19 Agent-Based Models
19.1 What Are Agent-Based Models?
19.2 Building an Agent-Based Model
19.3 Agent-Environment Interaction
19.4 Ecological and Evolutionary Models
Bibliography
Index
Comments
If you want to learn more about these ideas, check out my book Engaging Emergence: Turning Upheaval into Opportunity: bkconnection.com/books/title/engaging-emergence
Here is more info on warm data :hackernoon.com/warm-data-9f0fcd2a828c
here is more on symmathesy :norabateson.wordpress.com/2015/11/03/symmathesy-a-word-in-progress/
And my book is called Small Arcs of Larger circles
Best,
Nora Bateson
President, International Bateson Institute